JGI Metabolomics researchers Andrea Kuftin, Katherine Louie, and Trent Northen contributed to the paper “Development of platforms for functional characterization and production of phenazines using a multi-chassis approach via CRAGE,” which utilized metabolomics to analyze PCA (phenazine-1-carboxylic acid) and PDC (phenazine-1,6-dicarboxylic acid) from bacterial cultures. As previously highlighted, CRAGE (or […]
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Northen Lab researchers Marc Goethem, Andrew Osborn, Ben Bowen, Tami Swenson, and Trent Northen are authors on the recently published paper “Long-read metagenomics of soil communities reveals phylum-specific secondary metabolite dynamics.” Key to this paper are biosynthetic gene clusters, or BGCs, which are groups of genes that encode a metabolic […]
Ying Wang and Trent Northen wrote a Genome Watch article published in a recent issue of Nature Reviews Microbiology. The article explores how cognitive performance can be enhanced by metabolites and microorganisms and focuses on research from across a wide range of host organisms. One of the examples is a […]
The Northen Lab presented multiple posters at the American Geophysical Union (AGU) Fall Meeting, from December 13-17, 2021. Among the posters was “Retention of Low Molecular Weight Soil Organic Carbon (C) Affected by Minerals”, led by Qing Zheng. Soils store a significant amount of carbon (up to twice the amount […]
Global Natural Products Social Molecular Networking, or GNPS, is a platform built for the analysis of MSMS data using crowdsourced MS libraries [2,3]. Northen Lab members Ben Bowen, Katherine Louie, and Trent Northen recently contributed to the paper “GNPS Dashboard: collaborative exploration of mass spectrometry data in the web browser,” […]
The EcoBOT consists of a liquid handling robot with a built in, custom growth chamber, imaging stations and a robotic arm that integrates these components. To learn more, visit the EcoFAB website or watch the video below: Producer: Ashleigh Papp Videography: Marilyn Sargent Lawrence Berkeley National Laboratory